Adi_g108234 (NPSN13, ATNPSN13)

Aliases : NPSN13, ATNPSN13

Description : Qb-type NPSN-group component of SNARE membrane fusion complex & original description: none

Gene families : OG0002530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002530_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g108234

Target	Alias	Description	ECC score	Gene Family Method
AT2G35190	NSPN11, ATNPSN11, NPSN11	novel plant snare 11	0.04	OrthoFinder output from all 47 species
Ceric.35G009000.1	NPSN13,...	Qb-type NPSN-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Ehy_g07332	NPSN13, ATNPSN13	Qb-type NPSN-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
LOC_Os07g44350.1	NPSN13,...	NPSN group Qb-type SNARE protein	0.04	OrthoFinder output from all 47 species
Spa_g15091	NPSN12, ATNPSN12	Qb-type NPSN-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005484	SNAP receptor activity	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
MF	GO:0030674	protein-macromolecule adaptor activity	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0060090	molecular adaptor activity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005606	Sec20	225	299

External Links

No external refs found!