Ehy_g18442 (EMB2296)

Aliases : EMB2296

Description : component *(uL2) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000661 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g18442
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
Adi_g003140	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Adi_g010213	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Adi_g013225	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Adi_g023744	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Adi_g023745	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Adi_g023746	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Adi_g024120	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 39 species
Adi_g040096	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 39 species
Adi_g040097	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Adi_g043514	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 39 species
Adi_g078985	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Als_g18682	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Als_g43739	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Als_g50196	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Aob_g15757	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Aop_g13700	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Aop_g45625	No alias	not classified & original description: none	0.04	OrthoFinder output from all 39 species
Azfi_s1690.g105838	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Cba_g61704	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Cba_g70109	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Cpa\|evm.model.tig00020965.22	EMB2296	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 39 species
Dde_g50691	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Lfl_g10059	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 39 species
Msp_g27279	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Pir_g58784	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 39 species
Pir_g66068	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 39 species
Pnu_g32369	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Ppi_g08539	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 39 species
Ppi_g08540	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 39 species
Ppi_g18315	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Ppi_g35299	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Ppi_g39625	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Ppi_g39626	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 39 species
Ppi_g54379	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 39 species
Spa_g28652	No alias	not classified & original description: none	0.01	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022666	Rbsml_prot_L2_RNA-bd_dom	11	89
IPR022669	Ribosomal_L2_C	98	224

External Links

No external refs found!

Ehy_g18442 (EMB2296)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation