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  5. Adi_g105485

Adi_g105485 (HST, HST1)


Aliases : HST, HST1

Description : nucleocytoplasmic transport karyopherin *(XPO5) & original description: none


Gene families : OG0003900 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003900_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g105485

Target Alias Description ECC score Gene Family Method Actions
AT3G05040 HST, HST1 ARM repeat superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g03349 HST, HST1 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.02 OrthoFinder output from all 47 species
Ala_g15869 HST, HST1 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.02 OrthoFinder output from all 47 species
Aop_g36761 HST, HST1 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009565 HST, HST1 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.05 OrthoFinder output from all 47 species
Ceric.1Z160000.1 HST, HST1, Ceric.1Z160000 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.04 OrthoFinder output from all 47 species
Ceric.24G056400.1 HST, HST1,... not classified & original description: pacid=50628658... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000523.41 No alias Protein HASTY 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre10.g420400 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g04984 HST, HST1 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01021908001 HST, HST1 Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Gb_10620 HST, HST1 miRNA nuclear export factor (HASTY). XPO5... 0.03 OrthoFinder output from all 47 species
Len_g22948 HST, HST1 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.02 OrthoFinder output from all 47 species
Ore_g06561 HST, HST1 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.02 OrthoFinder output from all 47 species
Pir_g65035 HST, HST1 nucleocytoplasmic transport karyopherin *(XPO5) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001966 HST, HST1 not classified & original description: CDS=1-3540 0.02 OrthoFinder output from all 47 species
Sam_g29681 No alias nucleocytoplasmic transport karyopherin *(XPO5) &... 0.04 OrthoFinder output from all 47 species
Solyc01g098170.3.1 HST, HST1, Solyc01g098170 miRNA nuclear export factor (HASTY). XPO5... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013598 Exportin-1/Importin-b-like 109 267
IPR045478 Exportin-5_C 308 1152
No external refs found!