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  5. Ehy_g18168

Ehy_g18168 (MED34, ATRECQ2, RECQL2)


Aliases : MED34, ATRECQ2, RECQL2

Description : not classified & original description: none


Gene families : OG0007173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007173_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g18168
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
MA_10427638g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g02390.1 MED34, ATRECQ2, RECQL2 Mediator of RNA polymerase II transcription subunit 34... 0.02 OrthoFinder output from all 47 species
Zm00001e035873_P003 MED34, ATRECQ2,... ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR032284 RecQ_Zn-bd 348 410
IPR011545 DEAD/DEAH_box_helicase_dom 29 187
IPR001650 Helicase_C 236 335
IPR018982 RQC_domain 416 512
IPR029491 Helicase_HTH 673 770
IPR002121 HRDC_dom 567 631
No external refs found!