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  5. Adi_g103365

Adi_g103365 (SNL4)


Aliases : SNL4

Description : not classified & original description: none


Gene families : OG0000547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g103365

Target Alias Description ECC score Gene Family Method Actions
AT1G10250 No alias BEST Arabidopsis thaliana protein match is: SIN3-like 6... 0.02 OrthoFinder output from all 47 species
AT1G27250 No alias Paired amphipathic helix (PAH2) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G70060 SNL4 SIN3-like 4 0.03 OrthoFinder output from all 47 species
Ala_g17667 SNL4 component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species
Ceric.02G103800.1 SNL4, Ceric.02G103800 component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species
Dcu_g18942 SNL4 component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species
Lfl_g03517 SNL3, ATSIN3, SIN3 component *(SNL) of histone deacetylase machineries &... 0.02 OrthoFinder output from all 47 species
Solyc02g087373.1.1 SNL2, Solyc02g087373 Paired amphipathic helix protein Sin3-like 3... 0.02 OrthoFinder output from all 47 species
Solyc02g087377.1.1 SNL2, Solyc02g087377 Paired amphipathic helix protein Sin3-like 3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR031693 Sin3_C 17 264
No external refs found!