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  5. Ehy_g18049

Ehy_g18049 (FIP1[V], ATFIP1[V],...)


Aliases : FIP1[V], ATFIP1[V], FIPS5, ATFIPS5

Description : not classified & original description: none


Gene families : OG0001918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001918_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g18049
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT5G58040 FIP1[V],... homolog of yeast FIP1 [V] 0.03 OrthoFinder output from all 47 species
Ala_g13981 FIP1[V],... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0076.g037884 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Ceric.03G021000.1 FIP1[V],... not classified & original description: pacid=50571470... 0.04 OrthoFinder output from all 47 species
Ceric.31G051000.1 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.05 OrthoFinder output from all 47 species
Cre17.g745547 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g13384 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.04 OrthoFinder output from all 47 species
Dcu_g17315 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.08 OrthoFinder output from all 47 species
GSVIVT01034996001 FIP1[V],... FIP1[V]-like protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g17376 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.02 OrthoFinder output from all 47 species
Lfl_g24352 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Mp5g14310.1 FIP1[V],... component Fip1 of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Nbi_g22123 FIP1[V],... substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ore_g43037 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.06 OrthoFinder output from all 47 species
Pir_g30495 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species
Ppi_g03287 FIP1[V],... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g005320.3.1 FIP1[V],... component Fip1 of Cleavage and Polyadenylation... 0.06 OrthoFinder output from all 47 species
Spa_g15696 FIP1[V],... component *(Fip1) of Cleavage and Polyadenylation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR007854 Fip1_dom 407 449
No external refs found!