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  5. Ehy_g17817

Ehy_g17817


Description : not classified & original description: none


Gene families : OG0003008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003008_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g17817
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT4G29400 No alias Protein of unknown function (DUF3531) 0.03 OrthoFinder output from all 47 species
Ceric.14G067200.1 Ceric.14G067200 not classified & original description: pacid=50634031... 0.03 OrthoFinder output from all 47 species
Gb_09567 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_14630 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g37820.1 LOC_Os01g37820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g01238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023539_P002 Zm00001e023539 Homeobox-leucine zipper protein HOX32 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021920 DUF3531 130 270
No external refs found!