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  5. Ehy_g17786

Ehy_g17786


Description : not classified & original description: none


Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g17786

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00129060 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00067p00091510 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00085p00174790 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT4G04480 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.04 OrthoFinder output from all 47 species
AT4G22030 No alias F-box family protein with a domain of unknown function (DUF295) 0.04 OrthoFinder output from all 47 species
Aev_g42734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35971 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34559.t1 Aspi01Gene34559 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene34562.t1 Aspi01Gene34562 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34564.t1 Aspi01Gene34564 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0334.g065497 No alias not classified & original description: CDS=1-1488 0.03 OrthoFinder output from all 47 species
Ceric.17G060100.1 Ceric.17G060100 not classified & original description: pacid=50617754... 0.03 OrthoFinder output from all 47 species
Ceric.1Z159800.1 Ceric.1Z159800 not classified & original description: pacid=50567680... 0.04 OrthoFinder output from all 47 species
Ceric.1Z159900.1 Ceric.1Z159900 not classified & original description: pacid=50567683... 0.04 OrthoFinder output from all 47 species
Ceric.1Z166800.1 Ceric.1Z166800 not classified & original description: pacid=50632888... 0.04 OrthoFinder output from all 47 species
Ceric.1Z166900.1 Ceric.1Z166900 not classified & original description: pacid=50632887... 0.06 OrthoFinder output from all 47 species
Ceric.1Z240500.1 Ceric.1Z240500 not classified & original description: pacid=50576892... 0.06 OrthoFinder output from all 47 species
Dac_g32097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_15744 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_15745 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_15746 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_35317 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g13260.1 LOC_Os02g13260 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g00910.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g01090.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g17910.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g12175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g080840.1.1 Solyc02g080840 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g080850.1.1 Solyc02g080850 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g07848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014444_P001 Zm00001e014444 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027949 Chloroplast_duf 115 426
No external refs found!