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  5. Ehy_g17523

Ehy_g17523


Description : not classified & original description: none


Gene families : OG0003261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g17523

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00083380 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G23110 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.03 OrthoFinder output from all 47 species
Ala_g27391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031263 No alias not classified & original description: CDS=118-9102 0.02 OrthoFinder output from all 47 species
Ceric.15G038000.1 Ceric.15G038000 not classified & original description: pacid=50639478... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.1 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01012044001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_03748 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g10443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_29192g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g01480.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Ppi_g30742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0195.g025457 No alias not classified & original description: CDS=1-630 0.02 OrthoFinder output from all 47 species
Solyc02g014180.2.1 Solyc02g014180 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc02g014190.4.1 Solyc02g014190 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g22652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!