Description : component *(eL21) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001239_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00016p00252940 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
AT1G09590 | No alias | Translation protein SH3-like family protein | 0.04 | OrthoFinder output from all 47 species | |
AT1G09690 | No alias | Translation protein SH3-like family protein | 0.02 | OrthoFinder output from all 47 species | |
Aop_g09546 | No alias | component *(eL21) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.24G006900.1 | Ceric.24G006900 | component *(eL21) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Cre06.g278135 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01001130001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g04750.1 | LOC_Os03g04750 | component RPL21 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Mp6g01390.1 | No alias | component RPL21 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Msp_g34423 | No alias | component *(eL21) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c3_5550V3.1 | Pp3c3_5550 | Translation protein SH3-like family protein | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g21572 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g078960.2.1 | Solyc10g078960 | component RPL21 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g080590.2.1 | Solyc10g080590 | component RPL21 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e000341_P001 | Zm00001e000341 | component RPL21 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e012727_P001 | Zm00001e012727 | component RPL21 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e038963_P001 | Zm00001e038963 | component RPL21 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | HCCA |
MF | GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | IEP | HCCA |
CC | GO:0005743 | mitochondrial inner membrane | IEP | HCCA |
CC | GO:0005751 | mitochondrial respiratory chain complex IV | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
CC | GO:0019866 | organelle inner membrane | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
CC | GO:0045277 | respiratory chain complex IV | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
CC | GO:0070069 | cytochrome complex | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
CC | GO:0098803 | respiratory chain complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001147 | Ribosomal_L21e | 1 | 101 |
No external refs found! |