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  5. MA_118860g0010

MA_118860g0010


Description : Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa subsp. japonica (sp|q6yvx9|c3h16_orysj : 214.0)


Gene families : OG_01_0007012 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007012_tree ,
OG_02_0005443 (LandPlants) Phylogenetic Tree(s): OG_02_0005443_tree ,
OG_03_0006518 (SeedPlants) Phylogenetic Tree(s): OG_03_0006518_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_118860g0010
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Mp8g15710.1 No alias splicing factor (RGH3) 0.03 Archaeplastida
Pp3c3_25240V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Archaeplastida
Solyc01g103090.4.1 No alias splicing factor (RGH3) 0.03 Archaeplastida
Zm00001e014831_P001 No alias splicing factor (RGH3) 0.08 Archaeplastida
Mp8g15710.1 No alias splicing factor (RGH3) 0.03 LandPlants
Pp3c3_25240V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 LandPlants
Solyc01g103090.4.1 No alias splicing factor (RGH3) 0.03 LandPlants
Zm00001e014831_P001 No alias splicing factor (RGH3) 0.08 LandPlants
Solyc01g103090.4.1 No alias splicing factor (RGH3) 0.03 SeedPlants
Zm00001e014831_P001 No alias splicing factor (RGH3) 0.08 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 100 127
IPR000504 RRM_dom 33 90
No external refs found!