1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g17338

Ehy_g17338 (ATPUB17, PUB17)


Aliases : ATPUB17, PUB17

Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g17338

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00142930 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g03523 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43158.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08066 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02285 ATPUB17, PUB17 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g28100.1 PUB9, ATPUB9,... E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
MA_85119g0010 ATPUB17, PUB17 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Msp_g37725 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010151 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: CDS=1-1236 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021169 No alias not classified & original description: CDS=1-882 0.02 OrthoFinder output from all 47 species
Sam_g48712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g16801 PUB13, ATPUB13 E3 ubiquiTin ligase *(PUB8) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023475_P001 Zm00001e023475 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 431 469
IPR003613 Ubox_domain 294 364
No external refs found!