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  5. Ehy_g17220

Ehy_g17220


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g17220

Target Alias Description ECC score Gene Family Method Actions
Adi_g008851 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06624 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03275 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68684 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02665 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16641 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47525 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03386 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20355 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011789001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_12336 No alias RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g49280.1 LOC_Os01g49280 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os11g38800.1 LOC_Os11g38800 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Msp_g09866 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21354 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31396 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10536 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Smo420592 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Spa_g30245 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017493_P001 Zm00001e017493 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e021220_P001 Zm00001e021220 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e025697_P001 Zm00001e025697 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR022143 DUF3675 157 278
IPR011016 Znf_RING-CH 106 151
No external refs found!