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  5. Ehy_g16969

Ehy_g16969


Description : not classified & original description: none


Gene families : OG0002883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002883_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g16969

Target Alias Description ECC score Gene Family Method Actions
AT1G23170 No alias Protein of unknown function DUF2359, transmembrane 0.02 OrthoFinder output from all 47 species
Adi_g059883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019804 No alias not classified & original description: CDS=115-1845 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR019308 TMEM214 322 569
No external refs found!