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  5. Ehy_g16804

Ehy_g16804


Description : exoribonuclease *(RRP6L) & original description: none


Gene families : OG0002027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g16804

Target Alias Description ECC score Gene Family Method Actions
AT5G35910 No alias Polynucleotidyl transferase, ribonuclease H fold protein... 0.04 OrthoFinder output from all 47 species
Aob_g14628 No alias exoribonuclease *(RRP6L) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G014700.1 Ceric.19G014700 exoribonuclease *(RRP6L) & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01029953001 No alias RNA processing.RNA decay.exosome complex.associated... 0.03 OrthoFinder output from all 47 species
LOC_Os07g32890.1 LOC_Os07g32890 exoribonuclease (RRP6L) 0.02 OrthoFinder output from all 47 species
LOC_Os10g30100.1 LOC_Os10g30100 exoribonuclease (RRP6L) 0.04 OrthoFinder output from all 47 species
Nbi_g44024 No alias exoribonuclease *(RRP6L) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20342 No alias exoribonuclease *(RRP6L) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16356 No alias exoribonuclease *(RRP6L) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29907 No alias exoribonuclease *(RRP6L) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g018520.1.1 Solyc10g018520 exoribonuclease (RRP6L) 0.04 OrthoFinder output from all 47 species
Spa_g12919 No alias exoribonuclease *(RRP6L) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29233 No alias exoribonuclease *(RRP6L) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08818 No alias exoribonuclease *(RRP6L) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004727_P001 Zm00001e004727 exoribonuclease (RRP6L) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002121 HRDC_dom 482 530
IPR002562 3'-5'_exonuclease_dom 263 428
No external refs found!