Adi_g089360

Description : component *(VPS18) of HOPS/CORVET membrane tethering complexes & original description: none

Gene families : OG0004357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004357_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g089360

Target	Alias	Description	ECC score	Gene Family Method
Als_g03869	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.04	OrthoFinder output from all 47 species
Ceric.34G031500.1	Ceric.34G031500	component *(VPS18) of HOPS/CORVET membrane tethering...	0.04	OrthoFinder output from all 47 species
GSVIVT01030005001	No alias	Vesicle trafficking.target membrane...	0.06	OrthoFinder output from all 47 species
LOC_Os08g08060.1	LOC_Os08g08060	component VPS18 of HOPS/CORVET membrane tethering complexes	0.02	OrthoFinder output from all 47 species
Lfl_g02278	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.03	OrthoFinder output from all 47 species
MA_10429172g0010	No alias	component VPS18 of HOPS/CORVET membrane tethering complexes	0.03	OrthoFinder output from all 47 species
Mp4g11360.1	No alias	component VPS18 of HOPS/CORVET membrane tethering complexes	0.02	OrthoFinder output from all 47 species
Ore_g08914	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.04	OrthoFinder output from all 47 species
Sam_g30143	No alias	component *(VPS18) of HOPS/CORVET membrane tethering...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
MF	GO:0008312	7S RNA binding	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0045047	protein targeting to ER	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000547	Clathrin_H-chain/VPS_repeat	696	845
IPR007810	Pep3_Vps18	280	431

External Links

No external refs found!

Adi_g089360

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation