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Aliases : ARF6
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00200760 | ARF4,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00157690 | ARF6,... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G19850 | MP, IAA24, ARF5 | Transcriptional factor B3 family protein /... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G30330 | ARF6 | auxin response factor 6 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G35240 | ARF20 | auxin response factor 20 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G60450 | ARF4 | auxin response factor 4 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g014256 | ARF16 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g059116 | ARF6 | transcriptional repressor *(IAA/AUX) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g061151 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g068596 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g070345 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g098002 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g103007 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g110089 | HSS, ARF1-BP, ARF2, ORE14 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g110090 | ARF1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g02130 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g17029 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g22072 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene05878.t1 | ARF8, ATARF8,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene06586.t1 | ARF6, Aspi01Gene06586 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene11714.t1 | ARF6, Aspi01Gene11714 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene20867.t1 | TIR5, MSG1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33428.t1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene45721.t1 | ARF6, Aspi01Gene45721 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene53089.t1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene64733.t1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035934 | No alias | not classified & original description: CDS=1-342 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0129.g048848 | ARF6 | ARF-type transcription factor & original description: CDS=56-2815 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0433.g069577 | ARF6 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0934.g093100 | ARF6 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19294 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g27461 | ARF6 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36299 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08681 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12286 | ARF10 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008639001 | HSS, ARF1-BP, ARF2, ORE14 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01023149001 | ARF1 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025198001 | ARF10 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025691001 | ARF16 | RNA biosynthesis.transcriptional activation.B3... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01032251001 | ARF19, IAA22, ARF11 | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23328 | HSS, ARF1-BP, ARF2, ORE14 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25507 | ARF16 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_39685 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g48060.1 | ARF3, ETT, LOC_Os01g48060 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g36054.1 | ARF1, LOC_Os04g36054 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g43920.1 | ARF3, ETT, LOC_Os05g43920 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g28161 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14944 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g40471 | ARF1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432528g0010 | ARF4 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| MA_10432580g0010 | HSS, ARF1-BP, ARF2, ORE14 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| MA_85955g0020 | ARF19, IAA22, ARF11 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g07070.1 | ARF10 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g16463 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30357 | ARF16 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g38754 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g06380 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g19396 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19455 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g008995 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0095.g019239 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: CDS=1-3375 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28812 | No alias | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g077560.3.1 | ARF3, ETT, Solyc02g077560 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g056040.3.1 | ARF11, Solyc05g056040 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g008380.4.1 | ARF9, Solyc08g008380 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g069190.2.1 | ARF4, Solyc11g069190 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g20525 | ARF6 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g29254 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015164_P002 | ARF10, Zm00001e015164 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |