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  5. Adi_g088809

Adi_g088809 (CID12, ATRBP37, RBP37)


Aliases : CID12, ATRBP37, RBP37

Description : not classified & original description: none


Gene families : OG0000804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000804_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g088809
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT3G49390 CID10 CTC-interacting domain 10 0.02 OrthoFinder output from all 47 species
Adi_g007671 CID11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g46209 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19462 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01661 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026169 CID11 not classified & original description: CDS=99-1196 0.03 OrthoFinder output from all 47 species
Azfi_s1706.g105993 CID12, ATRBP37, RBP37 not classified & original description: CDS=1-921 0.02 OrthoFinder output from all 47 species
Cba_g07610 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre10.g439700 CID8 Polyadenylate-binding protein-interacting protein 11... 0.01 OrthoFinder output from all 47 species
Dac_g22950 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44818 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g11120.1 CID9, LOC_Os01g11120 Polyadenylate-binding protein-interacting protein 9... 0.02 OrthoFinder output from all 47 species
MA_15380g0010 CID12, ATRBP37, RBP37 Polyadenylate-binding protein-interacting protein 12... 0.01 OrthoFinder output from all 47 species
Mp4g11450.3 CID12, ATRBP37, RBP37 Polyadenylate-binding protein-interacting protein 11... 0.02 OrthoFinder output from all 47 species
Msp_g31891 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09538 CID12, ATRBP37, RBP37 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02795 CID12, ATRBP37, RBP37 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12178 CID12, ATRBP37, RBP37 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 110 177
IPR000504 RRM_dom 13 75
No external refs found!