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  5. Adi_g088338

Adi_g088338


Description : regulatory protein *(TVA) of cellulose synthase complex trafficking & original description: none


Gene families : OG0001095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g088338

Target Alias Description ECC score Gene Family Method Actions
AT1G68220 No alias Protein of unknown function (DUF1218) 0.02 OrthoFinder output from all 47 species
Aev_g03606 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Ala_g35334 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17277.t1 Aspi01Gene17277 regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Ceric.29G046300.1 Ceric.29G046300 not classified & original description: pacid=50624497... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58160.1 LOC_Os04g58160 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g27810.1 LOC_Os07g27810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10429894g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g20570 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Solyc12g013650.2.1 Solyc12g013650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g31299 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR009606 DEAL/Modifying_wall_lignin1/2 104 193
No external refs found!