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  5. Adi_g088302

Adi_g088302 (HIS1-3)


Aliases : HIS1-3

Description : linker histone *(H1) & original description: none


Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g088302

Target Alias Description ECC score Gene Family Method Actions
Ala_g08964 No alias linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42128.t1 HIS1-3, Aspi01Gene42128 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G013600.1 HIS1-3, Ceric.12G013600 linker histone *(H1) & original description:... 0.02 OrthoFinder output from all 47 species
Cre13.g567450 HIS1-3 Chromatin organisation.histones.H1 linker histone 0.01 OrthoFinder output from all 47 species
Ehy_g05478 No alias linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_02738 No alias linker histone (H1) 0.01 OrthoFinder output from all 47 species
LOC_Os07g08710.1 LOC_Os07g08710 linker histone (H1) 0.02 OrthoFinder output from all 47 species
Lfl_g24690 HIS1-3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_8477g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g14390.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g12026 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11041 No alias linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11042 No alias linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g083380.4.1 Solyc09g083380 linker histone (H1) 0.03 OrthoFinder output from all 47 species
Zm00001e011859_P001 Zm00001e011859 linker histone (H1) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 43 110
No external refs found!