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  5. Adi_g087512

Adi_g087512 (SPL3)


Aliases : SPL3

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g087512

Target Alias Description ECC score Gene Family Method Actions
Adi_g080762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30035.t1 Aspi01Gene30035 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036283 AtSPL9, SPL9 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s1820.g107212 No alias not classified & original description: CDS=1-336 0.03 OrthoFinder output from all 47 species
Cre02.g104700 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.01 OrthoFinder output from all 47 species
Dcu_g14928 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48516 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03958 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g49010.4 SPL2, LOC_Os06g49010 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Msp_g15344 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g015840.3.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Spa_g55183 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32347 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010067_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.01 OrthoFinder output from all 47 species
Zm00001e034628_P001 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 20 46
No external refs found!