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  5. Adi_g087296

Adi_g087296


Description : not classified & original description: none


Gene families : OG0000714 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000714_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g087296
Cluster HCCA: Cluster_336

Target Alias Description ECC score Gene Family Method Actions
Adi_g087292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g06980.1 LOC_Os03g06980 component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.03 OrthoFinder output from all 47 species
Len_g49055 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.03 OrthoFinder output from all 47 species
Nbi_g03477 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.03 OrthoFinder output from all 47 species
Ore_g15024 No alias component *(RPP25/POP6) or RPP20/POP7 of RNA-dependent... 0.02 OrthoFinder output from all 47 species
Sam_g33781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012088_P003 Zm00001e012088 component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.02 OrthoFinder output from all 47 species
Zm00001e039020_P004 Zm00001e039020 component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 19 77
No external refs found!