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  5. Adi_g087246

Adi_g087246 (TPR16)


Aliases : TPR16

Description : not classified & original description: none


Gene families : OG0001935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g087246

Target Alias Description ECC score Gene Family Method Actions
AT2G41520 TPR15 Heat shock protein DnaJ with tetratricopeptide repeat 0.03 OrthoFinder output from all 47 species
AT5G12430 TPR16 Heat shock protein DnaJ with tetratricopeptide repeat 0.03 OrthoFinder output from all 47 species
Als_g04505 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G035700.1 TPR16, Ceric.31G035700 not classified & original description: pacid=50573879... 0.03 OrthoFinder output from all 47 species
Dcu_g12352 TPR16 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g32058 TPR16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g31062.1 TPR16, LOC_Os05g31062 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g10464 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47191 TPR16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02472 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g16220.1 TPR16 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g13324 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05014 TPR16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35893 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39794 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02425 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g016410.3.1 TPR16, Solyc04g016410 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g30890 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38094 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026765_P001 Zm00001e026765 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!