Aliases : CLPR4
Description : non-proteolytic core component *(ClpR) of chloroplast Clp-type protease complex & original description: none
Gene families : OG0000988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000988_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00194810 | CLPR4,... | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00045p00207040 | evm_27.TU.AmTr_v1... | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene13918.t1 | Aspi01Gene13918 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g25400 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Cre03.g204350 | CLPR4 | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
Cre07.g331500 | No alias | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g10911 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g02711 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g03225 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01003696001 | CLPR4 | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
Len_g10203 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g01084 | CLPR4 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g07357 | CLPR1, SVR2, NCLPP5 | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g12637 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0008.g004018 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g22875 | CLPR4 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e017288_P001 | CLPR4, Zm00001e017288 | non-proteolytic core component ClpR of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032571_P001 | CLPR1, SVR2,... | non-proteolytic core component ClpR of chloroplast... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0004357 | glutamate-cysteine ligase activity | IEP | HCCA |
MF | GO:0004363 | glutathione synthase activity | IEP | HCCA |
MF | GO:0004807 | triose-phosphate isomerase activity | IEP | HCCA |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | HCCA |
BP | GO:0006749 | glutathione metabolic process | IEP | HCCA |
BP | GO:0006750 | glutathione biosynthetic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
BP | GO:0019184 | nonribosomal peptide biosynthetic process | IEP | HCCA |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
MF | GO:1904091 | non-ribosomal peptide synthetase activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023562 | ClpP/TepA | 113 | 292 |
No external refs found! |