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Aliases : PVA12
Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface & original description: none
Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00209140 | evm_27.TU.AmTr_v1... | Vesicle-associated protein 2-1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT3G60600 | VAP27, VAP27-1,... | vesicle associated protein | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g05136 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02457 | PVA12 | contact site protein (VAP27) of... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g27106 | No alias | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G049200.1 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.31G024900.1 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Cre03.g196900 | VAP27, VAP27-1,... | Vesicle-associated protein 1-1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g07429 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g35384 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g00665 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01001317001 | PVA12 | Vesicle-associated protein 1-1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017816001 | PVA12 | Vesicle-associated protein 1-2 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Gb_15070 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g46780.1 | LOC_Os04g46780 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g05890.1 | LOC_Os08g05890 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17263 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10766 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g04340.1 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g12280 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16185 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0053.g014133 | No alias | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15494 | No alias | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Smo438734 | PVA12 | Vesicle-associated protein 1-2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g007390.2.1 | PVA12, Solyc08g007390 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02524 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e021734_P002 | PVA12, Zm00001e021734 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023141_P002 | Zm00001e023141 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023177_P005 | Zm00001e023177 | contact site protein (VAP27) of... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e040240_P001 | Zm00001e040240 | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| MF | GO:0051087 | chaperone binding | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000535 | MSP_dom | 38 | 131 |
| No external refs found! |