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  5. Adi_g085873

Adi_g085873


Description : regulatory protein *(LARP6) of mRNA quality control & original description: none


Gene families : OG0002191 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002191_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g085873

Target Alias Description ECC score Gene Family Method Actions
Nbi_g13113 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
Ppi_g17515 No alias regulatory protein *(LARP6) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
Solyc08g015650.3.1 Solyc08g015650 La-related protein 6B OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc12g019000.2.1 Solyc12g019000 La-related protein 6B OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 292 358
IPR006630 La_HTH 199 256
No external refs found!