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  5. Adi_g085788

Adi_g085788 (VLN4, ATVLN4)


Aliases : VLN4, ATVLN4

Description : not classified & original description: none


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g085788

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00238270 VLN4, ATVLN4,... Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
Aob_g07408 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30354.t1 VLN4, ATVLN4,... villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30355.t1 ATVLN3, VLN3,... villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30356.t1 VLN4, ATVLN4,... villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G079800.1 ATVLN2, VLN2,... villin actin-crosslinking factor & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g02376 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024752001 VLN1, ATVLN1 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Len_g29289 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05023 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15028 ATVLN3, VLN3 villin acTin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010507_P006 VLN4, ATVLN4,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Zm00001e028314_P001 ATVLN2, VLN2,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Zm00001e031068_P001 VLN1, ATVLN1,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0061666 UFM1 ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
InterPro domains Description Start Stop
IPR003128 Villin_headpiece 243 278
No external refs found!