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  5. Ehy_g15984

Ehy_g15984 (SYD, CHR3)


Aliases : SYD, CHR3

Description : SMARCA component *(SYD/BRM/MINU) & original description: none


Gene families : OG0001489 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g15984

Target Alias Description ECC score Gene Family Method Actions
Aev_g04898 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.01 OrthoFinder output from all 39 species
Ala_g27421 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.02 OrthoFinder output from all 39 species
Als_g16533 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.02 OrthoFinder output from all 39 species
Als_g55083 SYD, CHR3 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Aspi01Gene25758.t1 SYD, CHR3,... SMARCA component *(SYD/BRM/MINU) & original description: none 0.02 OrthoFinder output from all 39 species
Aspi01Gene47132.t1 SYD, CHR3,... not classified & original description: none 0.01 OrthoFinder output from all 39 species
Azfi_s0335.g065512 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description:... 0.02 OrthoFinder output from all 39 species
Ceric.37G008600.1 SYD, CHR3,... SMARCA component *(SYD/BRM/MINU) & original description:... 0.05 OrthoFinder output from all 39 species
Dac_g15532 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.01 OrthoFinder output from all 39 species
Dcu_g38948 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.03 OrthoFinder output from all 39 species
Dde_g09827 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.03 OrthoFinder output from all 39 species
Len_g11421 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.02 OrthoFinder output from all 39 species
Lfl_g04300 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.01 OrthoFinder output from all 39 species
Nbi_g10938 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.01 OrthoFinder output from all 39 species
Ore_g37673 SYD, CHR3 not classified & original description: none 0.01 OrthoFinder output from all 39 species
Pir_g16211 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g13843 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.03 OrthoFinder output from all 39 species
Sacu_v1.1_s0089.g018707 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description:... 0.01 OrthoFinder output from all 39 species
Spa_g17788 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.02 OrthoFinder output from all 39 species
Tin_g08468 SYD, CHR3 SMARCA component *(SYD/BRM/MINU) & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0042393 histone binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 148 440
IPR001650 Helicase_C 466 579
IPR029295 SnAC 678 758
No external refs found!