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  5. Adi_g082189

Adi_g082189 (RGL1, RGL)


Aliases : RGL1, RGL

Description : GRAS-type transcription factor *(RAD1) & original description: none


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g082189
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00207840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
Ala_g39145 RGA, RGA1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68508.t1 RGA2, GAI,... transcription factor *(DELLA) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07760 RGL2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007532001 RGA2, GAI RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
Len_g48752 RGL1, RGL GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04944 RGA, RGA1 transcription factor *(DELLA) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002822 RGA, RGA1 transcription factor *(DELLA) & original description: CDS=1-2391 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017422 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-1875 0.03 OrthoFinder output from all 47 species
Smo83811 RGA, RGA1 External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
Solyc11g011260.1.1 RGA2, GAI, Solyc11g011260 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species
Spa_g20961 RGA, RGA1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 273 637
No external refs found!