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  5. Ehy_g15928

Ehy_g15928 (PUB13, ATPUB13)


Aliases : PUB13, ATPUB13

Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g15928

Target Alias Description ECC score Gene Family Method Actions
AT5G01830 No alias ARM repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G42340 PUB15 Plant U-Box 15 0.02 OrthoFinder output from all 47 species
Adi_g080188 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s2565.g112179 No alias not classified & original description: CDS=1-438 0.03 OrthoFinder output from all 47 species
Cba_g31463 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G074400.1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g02654 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18007 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032778001 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula 0.04 OrthoFinder output from all 47 species
Gb_08792 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
Gb_13754 PUB13, ATPUB13 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Len_g12870 PUB15 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04790 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_375372g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g31758 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005097 No alias not classified & original description: CDS=1-2154 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013821 No alias not classified & original description: CDS=1-987 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016119 PUB13, ATPUB13 E3 ubiquitin ligase & original description: CDS=1314-3077 0.02 OrthoFinder output from all 47 species
Zm00001e014566_P002 PUB9, ATPUB9,... E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 307 375
IPR000225 Armadillo 429 469
No external refs found!