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  5. Adi_g081475

Adi_g081475 (ATTRB3, TBP2, TRB3)


Aliases : ATTRB3, TBP2, TRB3

Description : telomeric dsDNA-binding protein & original description: none


Gene families : OG0003619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g081475

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00074950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Dcu_g03052 TRFL5 telomeric dsDNA-binding protein & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04142 TRFL5 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g59859 TRFL5 telomeric dsDNA-binding protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31866 TRFL5 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000387 spliceosomal snRNP assembly IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 585 632
No external refs found!