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  5. Adi_g081474

Adi_g081474 (STO)


Aliases : STO

Description : BBX class-IV transcription factor & original description: none


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g081474

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00250410 LZF1, STH3,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Aev_g04775 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02369 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12122 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g24013 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01175 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g05940.1 No alias transcription factor (BBX-DBB) 0.01 OrthoFinder output from all 47 species
Ore_g37373 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16992 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g062160.3.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 47
IPR000315 Znf_B-box 54 96
No external refs found!