Adi_g081371


Description : not classified & original description: none


Gene families : OG0002847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002847_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g081371

Target Alias Description ECC score Gene Family Method Actions
AT5G25520 No alias SPOC domain / Transcription elongation factor S-II protein 0.04 OrthoFinder output from all 47 species
Adi_g108706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02676 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.04 OrthoFinder output from all 47 species
Aob_g15719 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31394.t1 Aspi01Gene31394 regulatory protein *(BDR) involved in RNA polymerase-II... 0.03 OrthoFinder output from all 47 species
Ceric.07G056700.1 Ceric.07G056700 regulatory protein *(BDR) involved in RNA polymerase-II... 0.05 OrthoFinder output from all 47 species
GSVIVT01015599001 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01035723001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g09763 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.05 OrthoFinder output from all 47 species
Mp4g01870.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g36175 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.05 OrthoFinder output from all 47 species
Pir_g11843 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.02 OrthoFinder output from all 47 species
Ppi_g39270 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016191 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0159.g023849 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.04 OrthoFinder output from all 47 species
Sam_g36170 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.04 OrthoFinder output from all 47 species
Solyc07g007850.2.1 Solyc07g007850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g067790.4.1 Solyc08g067790 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g04580 No alias regulatory protein *(BDR) involved in RNA polymerase-II... 0.02 OrthoFinder output from all 47 species
Zm00001e014496_P001 Zm00001e014496 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e024973_P001 Zm00001e024973 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012921 SPOC_C 65 213
No external refs found!