Description : not classified & original description: none
Gene families : OG0002847 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002847_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G25520 | No alias | SPOC domain / Transcription elongation factor S-II protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g108706 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g02676 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.04 | OrthoFinder output from all 47 species | |
Aob_g15719 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene31394.t1 | Aspi01Gene31394 | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.07G056700.1 | Ceric.07G056700 | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01015599001 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01035723001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Len_g09763 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.05 | OrthoFinder output from all 47 species | |
Mp4g01870.1 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g36175 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g11843 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g39270 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0066.g016191 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0159.g023849 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g36170 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.04 | OrthoFinder output from all 47 species | |
Solyc07g007850.2.1 | Solyc07g007850 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g067790.4.1 | Solyc08g067790 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g04580 | No alias | regulatory protein *(BDR) involved in RNA polymerase-II... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e014496_P001 | Zm00001e014496 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024973_P001 | Zm00001e024973 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR012921 | SPOC_C | 65 | 213 |
No external refs found! |