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  5. Adi_g080818

Adi_g080818


Description : component *(SF3B2) of splicing factor 3B complex & original description: none


Gene families : OG0004021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g080818

Target Alias Description ECC score Gene Family Method Actions
Aob_g04313 No alias component *(SF3B2) of splicing factor 3B complex &... 0.02 OrthoFinder output from all 47 species
Cba_g15531 No alias component *(SF3B2) of splicing factor 3B complex &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.24 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.02 OrthoFinder output from all 47 species
Solyc03g006520.3.1 Solyc03g006520 component SF3B2 of splicing factor 3B complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
CC GO:0000781 chromosome, telomeric region IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR007180 DUF382 1 40
IPR006568 PSP_pro-rich 49 93
No external refs found!