1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g080135

Adi_g080135 (MGP)


Aliases : MGP

Description : C2H2 subclass IDD transcription factor & original description: none


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g080135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00204520 IDD2, AtIDD2,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT5G44160 NUC C2H2-like zinc finger protein 0.04 OrthoFinder output from all 47 species
Adi_g012803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g060453 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
Adi_g076861 IDD14, AtIDD14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22280 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g21518 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g18226 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01003119001 AtIDD12, IDD12 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01010961001 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01025658001 JKD RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os03g10140.1 LOC_Os03g10140 C2H2 zinc finger transcription factor. elicitor peptide... 0.02 OrthoFinder output from all 47 species
Pnu_g28092 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc06g062670.3.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc06g072360.3.1 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc06g075250.3.1 JKD, Solyc06g075250 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc10g084180.2.1 JKD, Solyc10g084180 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g18118 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e010628_P002 MGP, Zm00001e010628 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e014666_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035365_P003 MGP, Zm00001e035365 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e038625_P001 IDD16, AtIDD16,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!