1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g079612

Adi_g079612


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0001662 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001662_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g079612

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene08857.t1 Aspi01Gene08857 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57982.t1 Aspi01Gene57982 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G022700.1 Ceric.27G022700 E3 ubiquitin ligase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g07682 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426386g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g14832 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09758 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 247 317
IPR000225 Armadillo 688 725
IPR000225 Armadillo 728 766
IPR000225 Armadillo 646 684
IPR000225 Armadillo 565 602
No external refs found!