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  5. Adi_g078975

Adi_g078975 (RPL4)


Aliases : RPL4

Description : component *(uL4c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0007896 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007896_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g078975

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00221060 RPL4,... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
AT1G07320 RPL4 ribosomal protein L4 0.03 OrthoFinder output from all 47 species
Ala_g05983 RPL4 component *(uL4c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Als_g20889 RPL4 component *(uL4c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g05120 RPL4 component *(uL4c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g34049 RPL4 component *(uL4c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.09G057300.1 RPL4, Ceric.09G057300 component *(uL4c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cre11.g479500 RPL4 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Dcu_g06106 RPL4 component *(uL4c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ehy_g02216 RPL4 component *(uL4c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01024788001 RPL4 50S ribosomal protein L4, chloroplastic OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
Gb_03469 RPL4 component psRPL4 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
LOC_Os03g15870.1 RPL4, LOC_Os03g15870 component psRPL4 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Len_g13257 RPL4 component *(uL4c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g01030 RPL4 component *(uL4c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_2315568g0010 RPL4 50S ribosomal protein L4, chloroplastic OS=Nicotiana... 0.02 OrthoFinder output from all 47 species
Mp1g18940.1 RPL4 component psRPL4 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Msp_g19825 RPL4 component *(uL4c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc07g061900.3.1 RPL4, Solyc07g061900 component psRPL4 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Spa_g08728 RPL4 component *(uL4c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Tin_g24110 RPL4 component *(uL4c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Zm00001e001165_P001 RPL4, Zm00001e001165 component psRPL4 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002136 Ribosomal_L4/L1e 84 266
No external refs found!