Adi_g078651

Description : not classified & original description: none

Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g078651
Cluster	HCCA: Cluster_141

Target	Alias	Description	ECC score	Gene Family Method
AT1G72910	No alias	Toll-Interleukin-Resistance (TIR) domain-containing protein	0.02	OrthoFinder output from all 47 species
AT3G25510	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.02	OrthoFinder output from all 47 species
AT4G09420	No alias	Disease resistance protein (TIR-NBS class)	0.02	OrthoFinder output from all 47 species
Adi_g067988	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g069292	No alias	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Adi_g079036	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Adi_g086412	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01014397001	No alias	External stimuli response.biotic stress.pathogen...	0.03	OrthoFinder output from all 47 species
GSVIVT01038755001	No alias	TMV resistance protein N OS=Nicotiana glutinosa	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	2	86

External Links

No external refs found!