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  5. Adi_g077141

Adi_g077141 (PAT2)


Aliases : PAT2

Description : large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex & original description: none


Gene families : OG0006164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006164_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g077141

Target Alias Description ECC score Gene Family Method Actions
Aev_g10362 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Ala_g22699 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Aob_g12108 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species
Gb_19472 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex 0.03 OrthoFinder output from all 47 species
Ore_g20296 PAT2 large subunit beta of AP-3 Golgi to vacuole cargo... 0.02 OrthoFinder output from all 47 species
Smo118138 PAT2 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Zm00001e029209_P001 PAT2, Zm00001e029209 large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 482 620
IPR002553 Clathrin/coatomer_adapt-like_N 42 437
No external refs found!