Ehy_g15389


Description : component *(eL33) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0009580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009580_tree

Sequence : coding (download), protein (download)


Attention: This gene has ECC Pair graph <abbr title="Click to show help" href="/help/lowabundance" data-target="#helpModal">low abundance</abbr></strong>.</span> <br><br> <div class="pull-right"> <a href="#" class="btn btn-default" id="enable_pan" data-toggle="tooltip" title="Toggle Pan"><i class="fa fa-arrows" aria-hidden="true"></i></a> <a href="#" class="btn btn-default" id="enable_zoom" data-toggle="tooltip" title="Toggle zoom"><i class="fa fa-search" aria-hidden="true"></i></a> </div> <div style="height:550px; max-height:550px; margin-top:30px"> <canvas id="expression-profile" class="center-block" height="550"/> </div> <br> <div class="pull-right"> <a href="/profile/download/plot/1242062" class="btn btn-primary" download="plot_1242062.txt">Download</a> </div> <p><strong>Note:</strong>Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available <a href="/profile/view/1242062">here</a>.</p> <br> <div> <h3 class="banner-blue" id="coexpression_networks">Co-expression Networks</h3> <div class="table-responsive"> <table class="table table-striped table-separated" id="coexpression_table"> <thead> <tr> <th data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th>Actions</th> </tr> </thead> <tbody> <tr> <td><abbr title="Click to show help" href="/help/neighborhood" data-target="#helpModal">Neighborhood</abbr></td> <td>HRR: <strong>Ehy_g15389</strong></td> <td><a href="/network/download/neighbors/3743404" data-toggle="tooltip" data-placement="top" title="Download direct neighbors" download="neighbors_3743404.txt"><i class="fa fa-list"></i></span> <a href="/network/graph/3743404" data-toggle="tooltip" data-placement="top" title="View neighborhood as graph"><i class="fa fa-sitemap"></i></a> <span class="text-muted" data-toggle="tooltip" data-placement="top" title="Disabled for neighborhoods"><i class="fa fa-area-chart"></i></span> <span class="text-muted" data-toggle="tooltip" data-placement="top" title="Disabled for neighborhoods"><i class="fa fa-table"></i></span></td> </tr> <tr> <td><abbr title="Click to show help" href="/help/cluster" data-target="#helpModal">Cluster</abbr></td> <td>HCCA: <strong><a href="/cluster/view/42504" class="qtip_tooltip" qtip_href="/cluster/tooltip/42504">Cluster_52</a></strong></td> <td><a href="/cluster/view/42504" data-toggle="tooltip" data-placement="top" title="View cluster as table"><i class="fa fa-list"></i></a> <a href="/cluster/graph/42504" data-toggle="tooltip" data-placement="top" title="View cluster as graph"><i class="fa fa-sitemap"></i></a> <a href="/profile_comparison/cluster/42504" data-toggle="tooltip" data-placement="top" title="Compare profiles in this cluster"><i class="fa fa-area-chart"></i></a> <a href="/heatmap/cluster/42504" data-toggle="tooltip" data-placement="top" title="Heatmap of profiles in this cluster"><i class="fa fa-table"></i></a></td> </tr> </tbody> </table> </div> </div> <br> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr> <td class="col-xs-12"><p>No GO annotation available for this sequence</p></td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/2891" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum." [EC:3.1.3.2]">GO:0003993</a></td> <td class="col-xs-6">acid phosphatase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3938" data-toggle="tooltip" data-placement="top" title=""Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells." [GOC:ai, GOC:dgf]">GO:0005215</a></td> <td class="col-xs-6">transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/3939" data-toggle="tooltip" data-placement="top" title=""Enables the facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size)." [GOC:cy, GOC:mtg_transport, GOC:pr, ISBN:0815340729]">GO:0005216</a></td> <td class="col-xs-6">monoatomic ion channel activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/9076" data-toggle="tooltip" data-placement="top" title=""Enables the transfer of an ion from one side of a membrane to the other." [GOC:dgf, GOC:mtg_transport, ISBN:0815340729]">GO:0015075</a></td> <td class="col-xs-6">monoatomic ion transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/9239" data-toggle="tooltip" data-placement="top" title=""Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules." [GOC:mtg_transport, ISBN:0815340729]">GO:0015267</a></td> <td class="col-xs-6">channel activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/9245" data-toggle="tooltip" data-placement="top" title=""Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts." [GOC:mtg_transport, ISBN:0815340729]">GO:0015276</a></td> <td class="col-xs-6">ligand-gated monoatomic ion channel activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/9874" data-toggle="tooltip" data-placement="top" title=""A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it." [GOC:dos, GOC:mah, ISBN:0815316194]">GO:0016020</a></td> <td class="col-xs-6">membrane</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/10508" data-toggle="tooltip" data-placement="top" title=""Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate." [GOC:curators, GOC:pg]">GO:0016791</a></td> <td class="col-xs-6">phosphatase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/13265" data-toggle="tooltip" data-placement="top" title=""Enables the transfer of a single solute from one side of a membrane to the other by a mechanism involving conformational change, either by facilitated diffusion or in a membrane potential dependent process if the solute is charged." [GOC:mtg_transport, ISBN:0815340729]">GO:0022803</a></td> <td class="col-xs-6">passive transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/13279" data-toggle="tooltip" data-placement="top" title=""Enables the transmembrane transfer of a solute by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts." [GOC:mtg_transport, ISBN:0815340729]">GO:0022834</a></td> <td class="col-xs-6">ligand-gated channel activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/13281" data-toggle="tooltip" data-placement="top" title=""Enables the transmembrane transfer of a solute by a channel that opens in response to a specific stimulus." [GOC:mtg_transport]">GO:0022836</a></td> <td class="col-xs-6">gated channel activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/13282" data-toggle="tooltip" data-placement="top" title=""Enables the transmembrane transfer of a solute by a channel that opens in response to a specific ion stimulus." [GOC:mtg_transport]">GO:0022839</a></td> <td class="col-xs-6">monoatomic ion gated channel activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/13296" data-toggle="tooltip" data-placement="top" title=""Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other." [GOC:jid, GOC:mtg_transport, ISBN:0815340729]">GO:0022857</a></td> <td class="col-xs-6">transmembrane transporter activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/20476" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3." [GOC:jl]">GO:0042578</a></td> <td class="col-xs-6">phosphoric ester hydrolase activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="panel-body"> <p>No InterPro domains available for this sequence</p> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">CoNekT</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script> function init_qtip() { $('.qtip_tooltip').each(function() { $(this).qtip({ content: { text: function(event, api) { $.ajax({ url: api.elements.target.attr('qtip_href') }) .then(function(content) { // Set the tooltip content upon successful retrieval api.set('content.text', content); 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