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  5. Ehy_g14463

Ehy_g14463


Description : not classified & original description: none


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g14463
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00115860 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G11412 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
AT5G53720 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
Als_g26891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g34956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39475.t2 Aspi01Gene39475 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g48340.1 LOC_Os02g48340 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g51890.1 LOC_Os02g51890 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g14190.1 LOC_Os03g14190 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os03g17760.1 LOC_Os03g17760 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g41790.1 LOC_Os06g41790 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g03686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436590g0030 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g01579 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g19941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo100311 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Zm00001e037573_P001 Zm00001e037573 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 14 70
No external refs found!