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  5. Ehy_g14377

Ehy_g14377 (PTAC6)


Aliases : PTAC6

Description : cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6) & original description: none


Gene families : OG0007877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007877_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Ehy_g14377
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00136520 PTAC6,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
AT1G21600 PTAC6 plastid transcriptionally active 6 0.04 OrthoFinder output from all 47 species
Cba_g25899 PTAC6 cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... 0.02 OrthoFinder output from all 47 species
Ceric.38G052000.1 PTAC6, Ceric.38G052000 cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... 0.02 OrthoFinder output from all 47 species
Dcu_g39158 PTAC6 cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... 0.03 OrthoFinder output from all 47 species
GSVIVT01008807001 PTAC6 RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
LOC_Os11g01890.1 PTAC6, LOC_Os11g01890 PAP8/TAC6 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Mp8g10030.1 PTAC6 PAP8/TAC6 cofactor of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Nbi_g00889 PTAC6 cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... 0.02 OrthoFinder output from all 47 species
Ore_g40614 PTAC6 cofactor of plastid-encoded RNA polymerase *(PAP8/TAC6)... 0.03 OrthoFinder output from all 47 species
Solyc04g057870.3.1 PTAC6, Solyc04g057870 PAP8/TAC6 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!