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  5. Adi_g065903

Adi_g065903


Description : not classified & original description: none


Gene families : OG0002822 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002822_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g065903

Target Alias Description ECC score Gene Family Method Actions
AT5G46020 No alias CONTAINS InterPro DOMAIN/s: Casein kinase substrate,... 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001665 No alias not classified & original description: CDS=100-513 0.05 OrthoFinder output from all 47 species
Mp3g01710.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g03338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g43314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019840_P002 Zm00001e019840 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019380 Casein_kinase_sb_PP28 102 168
No external refs found!