Adi_g062378

Description : not classified & original description: none

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g062378

Target	Alias	Description	ECC score	Gene Family Method
AT1G58400	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
AT1G58410	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT3G07040	RPM1, RPS3	NB-ARC domain-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT5G35450	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	OrthoFinder output from all 47 species
Adi_g060852	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01026725001	No alias	Putative disease resistance protein At1g50180...	0.04	OrthoFinder output from all 47 species
GSVIVT01026728001	No alias	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01026750001	HRT, RCY1, RPP8	Disease resistance protein RPP8 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Solyc10g008220.4.1	Solyc10g008220	Putative late blight resistance protein homolog R1A-6...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000315	organellar large ribosomal subunit	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	HCCA
CC	GO:0005762	mitochondrial large ribosomal subunit	IEP	HCCA
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0031369	translation initiation factor binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	19	110

External Links

No external refs found!