Ehy_g13869 (AGL6)

Aliases : AGL6

Description : MADS/AGL-type transcription factor & original description: none

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g13869

Target	Alias	Description	ECC score	Gene Family Method
Als_g28471	SHP2, AGL5	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g30277	GL19, AGL19	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g37797	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g68054	GL19, AGL19	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene12156.t1	AGL42, Aspi01Gene12156	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.12G052200.1	GL19, AGL19,...	MADS/AGL-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ceric.36G037400.1	ANR1, AGL44,...	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
LOC_Os03g03070.1	GL19, AGL19,...	MADS-box transcription factor 50 OS=Oryza sativa subsp....	0.03	OrthoFinder output from all 47 species
LOC_Os04g23910.1	AGL16, LOC_Os04g23910	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Len_g22237	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g08300	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g38119	STK, AGL11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_1767g0010	AGL66	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
Msp_g09451	AGL21	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g31321	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g35963	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g01864	AGL2, SEP1	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g18075	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g23267	AGL70, MAF3, FCL3	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g64963	AGL6	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000222	AGL33	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013783	STK, AGL11	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g36311	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g48748	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc12g042015.1.1	AGL62, Solyc12g042015	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
Spa_g47544	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	38	85
IPR002487	TF_Kbox	109	182

External Links

No external refs found!

Ehy_g13869 (AGL6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation