- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : SE
Description : component *(SERRATE) of DCL1-HYL1 miRNA biogenesis complex & original description: none
Gene families : OG0003096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003096_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00219930 | SE,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05956 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g04823 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g26903 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02258 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07197 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G039000.1 | SE, Ceric.03G039000 | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Cre13.g575900 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g10898 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g08633 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037454001 | SE | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g40560.1 | SE, LOC_Os08g40560 | C2H2 zinc finger transcription factor. component SERRATE... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g10116 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02072 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10426519g0010 | SE | C2H2 zinc finger transcription factor. component SERRATE... | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g23090.1 | SE | C2H2 zinc finger transcription factor. component SERRATE... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36418 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g04707 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g00841 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62657 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002104 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s3319.g028716 | SE | not classified & original description: CDS=1-597 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19467 | No alias | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g09411 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
| MF | GO:0140612 | DNA damage sensor activity | IEP | HCCA |
| MF | GO:0140664 | ATP-dependent DNA damage sensor activity | IEP | HCCA |
| No external refs found! |