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  5. Adi_g060943

Adi_g060943


Description : mRNA chaperone *(RLSB/BSF) & original description: none


Gene families : OG0002842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g060943

Target Alias Description ECC score Gene Family Method Actions
Ala_g06275 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g31939 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16982 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17119 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11259 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47105.t1 Aspi01Gene47105 mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07748 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g60889 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G005900.1 Ceric.39G005900 mRNA chaperone *(RLSB/BSF) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g04128 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013706001 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.02 OrthoFinder output from all 47 species
LOC_Os05g45920.1 LOC_Os05g45920 plastidial mRNA chaperone (RLSB/BSF) 0.03 OrthoFinder output from all 47 species
Len_g21212 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26693 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g16529 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14237 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15308 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17865 No alias mRNA chaperone *(RLSB/BSF) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 758 816
No external refs found!