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  5. Adi_g060210

Adi_g060210 (HUA1)


Aliases : HUA1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0002527 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002527_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g060210

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00115p00126760 HUA1,... RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 OrthoFinder output from all 47 species
AT3G12680 HUA1 floral homeotic protein (HUA1) 0.02 OrthoFinder output from all 47 species
Als_g62719 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0075.g037599 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G016300.1 HUA1, Ceric.30G016300 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ehy_g07725 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Lfl_g24666 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ore_g33880 HUA1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pnu_g32445 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ppi_g12544 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g13535 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Solyc12g017410.2.1 HUA1, Solyc12g017410 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Tin_g09456 HUA1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098533 ATPase dependent transmembrane transport complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 154 179
IPR000571 Znf_CCCH 361 384
IPR000571 Znf_CCCH 102 126
IPR000571 Znf_CCCH 225 249
IPR000571 Znf_CCCH 310 334
No external refs found!