Ehy_g13721

Description : not classified & original description: none

Gene families : OG0008339 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008339_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g13721
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00144p00054940	EMB2453, ATPPR5,...	Pentatricopeptide repeat-containing protein At2g40240,...	0.02	OrthoFinder output from all 47 species
Gb_33603	No alias	Pentatricopeptide repeat-containing protein At1g12775,...	0.01	OrthoFinder output from all 47 species
MA_10430342g0020	No alias	Pentatricopeptide repeat-containing protein At3g62470,...	0.02	OrthoFinder output from all 47 species
MA_18233g0020	No alias	Pentatricopeptide repeat-containing protein At2g40240,...	0.04	OrthoFinder output from all 47 species
Solyc03g095960.1.1	Solyc03g095960	Pentatricopeptide repeat-containing protein At2g40240,...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
BP	GO:0006354	DNA-templated transcription elongation	IEP	HCCA
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	HCCA
CC	GO:0008023	transcription elongation factor complex	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
CC	GO:0016593	Cdc73/Paf1 complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	322	351
IPR002885	Pentatricopeptide_repeat	248	297
IPR002885	Pentatricopeptide_repeat	353	402
IPR002885	Pentatricopeptide_repeat	457	505
IPR002885	Pentatricopeptide_repeat	144	191
IPR002885	Pentatricopeptide_repeat	422	450
IPR002885	Pentatricopeptide_repeat	210	241

External Links

No external refs found!