1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g059728

Adi_g059728


Description : not classified & original description: none


Gene families : OG0005855 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005855_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g059728

Target Alias Description ECC score Gene Family Method Actions
Ala_g15581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01309 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01038579001 No alias No description available 0.02 OrthoFinder output from all 47 species
Msp_g12111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17740 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005158 No alias not classified & original description: CDS=96-1199 0.03 OrthoFinder output from all 47 species
Smo93701 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g150120.1.1 Solyc02g150120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g17209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014460_P003 Zm00001e014460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 228 247
IPR002048 EF_hand_dom 183 198
IPR002048 EF_hand_dom 316 378
IPR002048 EF_hand_dom 267 283
No external refs found!